Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548e in BPH Prostate Dhanasekaran Cluster 16 Table contains all genes in the BPH Prostate Dhanasekaran cluster number 16. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548e 5119 CHMP1A chromatin modifying protein 1A [Source:HGNC Symbol;Acc:8740] zzz999 1060 CENPC1 centromere protein C 1 [Source:HGNC Symbol;Acc:1854] T 23360 FNBP4 formin binding protein 4 [Source:HGNC Symbol;Acc:19752] T 340385 ZNF517 zinc finger protein 517 [Source:HGNC Symbol;Acc:27984] zzz999 51427 ZNF107 zinc finger protein 107 [Source:HGNC Symbol;Acc:12887] zzz999 117145 THEM4 thioesterase superfamily member 4 [Source:HGNC Symbol;Acc:17947] zzz999 23215 PRRC2C proline-rich coiled-coil 2C [Source:HGNC Symbol;Acc:24903] T 7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586] zzz999 284565 NBPF15 neuroblastoma breakpoint family, member 15 [Source:HGNC Symbol;Acc:28791] zzz999 55294 FBXW7 F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:16712] P T 344148 NCKAP5 NCK-associated protein 5 [Source:HGNC Symbol;Acc:29847] zzz999 10336 PCGF3 polycomb group ring finger 3 [Source:HGNC Symbol;Acc:10066] P 23143 LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:HGNC Symbol;Acc:20309] zzz999 80012 PHC3 polyhomeotic homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:15682] P 84557 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha [Source:HGNC Symbol;Acc:6838] zzz999 8323 FZD6 frizzled homolog 6 (Drosophila) [Source:HGNC Symbol;Acc:4044] T 79598 CEP97 centrosomal protein 97kDa [Source:HGNC Symbol;Acc:26244] P T 8507 ENC1 ectodermal-neural cortex 1 (with BTB-like domain) [Source:HGNC Symbol;Acc:3345] P 114327 EFHC1 EF-hand domain (C-terminal) containing 1 [Source:HGNC Symbol;Acc:16406] T 374655 ZNF710 zinc finger protein 710 [Source:HGNC Symbol;Acc:25352] zzz999 619279 ZNF704 zinc finger protein 704 [Source:HGNC Symbol;Acc:32291] zzz999 800 CALD1 caldesmon 1 [Source:HGNC Symbol;Acc:1441] zzz999 27229 TUBGCP4 tubulin, gamma complex associated protein 4 [Source:HGNC Symbol;Acc:16691] zzz999 219287 FAM123A family with sequence similarity 123A [Source:HGNC Symbol;Acc:26360] zzz999 55291 PPP6R3 protein phosphatase 6, regulatory subunit 3 [Source:HGNC Symbol;Acc:1173] P 130271 PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:HGNC Symbol;Acc:30506] zzz999 84612 PARD6B par-6 partitioning defective 6 homolog beta (C. elegans) [Source:HGNC Symbol;Acc:16245] zzz999 79056 PRRG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:HGNC Symbol;Acc:30799] zzz999 23261 CAMTA1 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:18806] P T 285753 CEP57L1 centrosomal protein 57kDa-like 1 [Source:HGNC Symbol;Acc:21561] zzz999 26054 SENP6 SUMO1/sentrin specific peptidase 6 [Source:HGNC Symbol;Acc:20944] T 57489 ODF2L outer dense fiber of sperm tails 2-like [Source:HGNC Symbol;Acc:29225] zzz999 94081 SFXN1 sideroflexin 1 [Source:HGNC Symbol;Acc:16085] zzz999 670 BPHL biphenyl hydrolase-like (serine hydrolase) [Source:HGNC Symbol;Acc:1094] zzz999 55000 zzz999 zzz999 zzz999 5277 PIGA phosphatidylinositol glycan anchor biosynthesis, class A [Source:HGNC Symbol;Acc:8957] P T 6125 RPL5 ribosomal protein L5 [Source:HGNC Symbol;Acc:10360] zzz999 50808 AK3 adenylate kinase 3 [Source:HGNC Symbol;Acc:17376] zzz999 122961 ISCA2 iron-sulfur cluster assembly 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19857] zzz999 51315 KRCC1 lysine-rich coiled-coil 1 [Source:HGNC Symbol;Acc:28039] zzz999 6194 RPS6 ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] zzz999 10565 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15772] zzz999 9736 USP34 ubiquitin specific peptidase 34 [Source:HGNC Symbol;Acc:20066] P T 150962 PUS10 pseudouridylate synthase 10 [Source:HGNC Symbol;Acc:26505] zzz999 83890 SPATA9 spermatogenesis associated 9 [Source:HGNC Symbol;Acc:22988] zzz999 26986 PABPC1 poly(A) binding protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:8554] zzz999 3178 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031] zzz999 4306 NR3C2 nuclear receptor subfamily 3, group C, member 2 [Source:HGNC Symbol;Acc:7979] P 220869 CBWD5 COBW domain containing 5 [Source:HGNC Symbol;Acc:24584] zzz999 29896 TRA2A transformer 2 alpha homolog (Drosophila) [Source:HGNC Symbol;Acc:16645] zzz999 9857 CEP350 centrosomal protein 350kDa [Source:HGNC Symbol;Acc:24238] zzz999 9975 NR1D2 nuclear receptor subfamily 1, group D, member 2 [Source:HGNC Symbol;Acc:7963] zzz999 6304 SATB1 SATB homeobox 1 [Source:HGNC Symbol;Acc:10541] T 81627 TRMT1L TRM1 tRNA methyltransferase 1-like [Source:HGNC Symbol;Acc:16782] zzz999 3131 HLF hepatic leukemia factor [Source:HGNC Symbol;Acc:4977] P 55075 UACA uveal autoantigen with coiled-coil domains and ankyrin repeats [Source:HGNC Symbol;Acc:15947] P 9101 USP8 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:12631] zzz999 10746 MAP3K2 mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:6854] zzz999 8481 OFD1 oral-facial-digital syndrome 1 [Source:HGNC Symbol;Acc:2567] zzz999 221400 TDRD6 tudor domain containing 6 [Source:HGNC Symbol;Acc:21339] zzz999 5340 PLG plasminogen [Source:HGNC Symbol;Acc:9071] zzz999 51134 CCDC41 coiled-coil domain containing 41 [Source:HGNC Symbol;Acc:17966] T 84527 ZNF559 zinc finger protein 559 [Source:HGNC Symbol;Acc:28197] zzz999 9812 KIAA0141 KIAA0141 [Source:HGNC Symbol;Acc:28969] zzz999 9295 SRSF11 serine/arginine-rich splicing factor 11 [Source:HGNC Symbol;Acc:10782] P

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